MetaNetX
Automated Model Construction and Genome Annotation for Large-Scale Metabolic Networks
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Summary
Pick from repository
Import model
Upload reactions
Delete models
Upload genome
Revived!
Analyze
Flux balance (FBA)
Groups of coupled reactions (GCR)
Blocked reactions (BLO)
Reaction knockout (RKO)
Gene/peptide knockout (PKO)
Create / Modify
Combine logically
Split and merge
Growth recovery (GRE)
Build from a genome (BUILD)
Revived!
Utilities
Search/Download MNXref namespace
MNXref ID mapper
SPARQL query
Reset session
Documents
Getting started
A short tutorial
Model internals
About
help [AT] metanetx.org
Info / How to cite
SPARQL query editor
MetaNetX SPARQL endpoint:
https://rdf.metanetx.org/sparql/
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MNXref data RDF: MNXref.ttl.gz
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MetaNetX model RDF: MNXmnet.ttl.gz
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MNXref schema RDF: MNXref_schema.ttl
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Widoco schema documentation
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Diagrams to document the MetaNetX RDF schema
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A collection of tutorials about how to query SIB resources with SPARQL